about std.csv and derived format
bioinfornatics
bioinfornatics at fedoraproject.org
Wed Feb 29 16:52:38 PST 2012
Le mercredi 29 février 2012 à 13:23 +0100, Jesse Phillips a écrit :
> On Wednesday, 29 February 2012 at 11:51:29 UTC, bioinfornatics
> wrote:
> > Le mercredi 29 février 2012 à 12:42 +0100, bioinfornatics a
> > écrit :
> >> Dear,
> >>
> >> I would like to parse this file:
> >> http://genome.ucsc.edu/goldenPath/help/ItemRGBDemo.txt
>
> > My problem is:
> > - need to parse data in csv format
> > - how manage with optional field
>
> It looks like the data is tab delimited so separator is a tab.
> There are no optional fields in CSV, but you can disable
> exceptions.
>
> auto records = csvReader!(Bed,Malformed.ignore)(str,'\t');
thanks jesse;
how i can convert inputRange return type to Bed ?
csvReader return a type that change dynamycally so if i use a template
function the type is never same and i can't hard write a copy to Bed
type.
example if i use BedData3 or BedData4:
-------------------------
struct BedData3{
string chrom; // 0
size_t chromStart; // 1
size_t chromEnd; // 2
string name; // 3
}
struct BedData4{
string chrom; // 0
size_t chromStart; // 1
size_t chromEnd; // 2
string name; // 3
size_t score; // 4
}
------------------------
i have try to deal with ReturnType but i fail.
paste https://gist.github.com/1946288
at line 294 bedReader take ane BedData3 tp 11
then at line 338 how get an array of record and store this array into
struct bed line 192
thanks a lot
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