Fasta parser

bioinfornatics bioinfornatics at fedoraproject.org
Mon Nov 12 14:26:09 PST 2012


Le dimanche 11 novembre 2012 à 18:34 +0100, bioinfornatics a écrit :
> Hi,
> I wrote a fasta parser for biology computing
> http://pastebin.geany.org/yheQN/
> 
> I would like to get your experience to know if the writer could be
> better. The given parser use MmFile and Phobos range.
> 
> fasta specification format => http://en.wikipedia.org/wiki/FASTA_format
> 

Tanks to all this one http://dpaste.dzfl.pl/1f0aef89 works has
bidirectional range :-)
I will take a look to Dmitry comment about toString. 
at Ali about fasta, fasta format is as an array where is wrote into a
plain text file. So they are no restriction in more it is not more
harder to parse it from forward or reverse with mmfile i do not know how
do same this regular file struct.



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