Speeding up text file parser (BLAST tabular format)
Fredrik Boulund via Digitalmars-d-learn
digitalmars-d-learn at puremagic.com
Tue Sep 15 01:55:43 PDT 2015
On Monday, 14 September 2015 at 18:31:38 UTC, H. S. Teoh wrote:
> I tried implementing a crude version of this (see code below),
> and found that manually calling GC.collect() even as frequently
> as once every 5000 loop iterations (for a 500,000 line test
> input file) still gives about 15% performance improvement over
> completely disabling the GC. Since most of the arrays involved
> here are pretty small, the frequency could be reduced to once
> every 50,000 iterations and you'd pretty much get the 20%
> performance boost for free, and still not run out of memory too
> quickly.
Interesting, I'll have to go through your code to understand
exactly what's going on. I also noticed some GC-related stuff
high up in my profiling, but had no idea what could be done about
that. Appreciate the suggestions!
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